To obtain colored vowels in Arabic script, we can use ArabTeX with the acolor.sty. The following example shows how to use it:
\documentclass[a4paper,12pt]{report}
\usepackage[utf8,latin1]{inputenc}
\usepackage[french]{babel}
\usepackage[T1]{fontenc}
\usepackage{amsmath,amsfonts,amssymb}
\usepackage{graphicx}
\usepackage{arabtex}
\usepackage{acolor}
\usepackage{fancybox}
\usepackage{pgf,tikz}
\usepackage[left=1.5cm,right=1.5cm,top=2.5cm,bottom=2.5cm]{geometry}
\definecolor{lightyellow}{rgb}{1,1,.933777}
\definecolor{darkgreen}{rgb}{0.2,0.6,0.2}
\definecolor{poppyred}{rgb}{0.89,0.08,0.3}
\definecolor{poppyredd}{rgb}{0.78,0.0,0.09}
\definecolor{poppyreddd}{rgb}{0.63,0.0,0.0}
\pagestyle{empty}
\begin{document}
\def\ombre[#1][#2]#3{%
\begin{tikzpicture}
\node[text=#2,opacity=0.5] (ombre)
at (0,0) {#3};
\node[text=#1] at (-.089,.089) {#3};
\end{tikzpicture}
}
\setlength{\fboxrule}{3pt}
\setlength{\fboxsep}{4pt}
\begin{center}
\fcolorbox{blue!30!black}{lightyellow!47!white}{\ombre[blue!30!black][yellow]{\Huge \setnashbf \RL{\fullvocalize \acolor{diacritics}{poppyred} \acolor{letters}{darkgreen} $\bigstar$ bismi al-ll_ahi \acolor{diacritics}{poppyredd} al-rra.h-m_ani \acolor{diacritics}{poppyreddd} al-rra.hImi $\bigstar $}}}
\end{center}
\bigskip
\begin{center}
\fcolorbox{blue!30!black}{lightyellow!47!white}{\ombre[blue!30!black][yellow]{\LARGE \setnashbf \RL{ \fullvocalize \acolor{diacritics}{blue} \acolor{letters}{darkgreen}
$\ast$ wa bihi na-s-ta-`Inu wa al-.ha--mdu li-ll_ahi a-lla_dI yassaranA \acolor{hamza}{purple} lil-'a`--mAli al-.s.sAli.haTi $\ast$ }}}
\end{center}
\end{document}