Based on the OP's comments, the central issue is not how to move all terms to the left side of the equation, which can be done in many ways. For instance,
-Subtract @@ Eliminate[y == x + n && x^2/6 + y^2/3 == 1, y] == 0
(* -6 + 2 n^2 + 4 n x + 3 x^2 == 0*)
Instead, the issue is, how to keep Mathematica from displaying the result in canonical order, as above. This was addressed sometime ago here, but without an integer term. A simple approach is to generalize the earlier solution as follows:
newreorderSymbols[expr_, symbols_List] := With[{s = symbols, i = First@Cases[expr, _Integer]},
HoldForm[Evaluate[(expr /. i -> z /. Thread[s -> Sort@s])]] /. Thread[Sort@s -> s] /. z -> i]
-Subtract @@ Eliminate[y == x + n && x^2/6 + y^2/3 == 1, y];
newreorderSymbols[%, {x, n}] == 0
(* 3 x^2 + 4 x n + 2 n^2 - 6 == 0*)
but, it contains x n instead of n x. The precise desired result instead can be obtained from
-Subtract @@ Eliminate[y == x + n && x^2/6 + y^2/3 == 1, y];
(HoldForm[Evaluate[Reverse[List @@ %]]] /. List -> Plus) == 0
(* 3 x^2 + 4 n x + 2 n^2 - 6 == 0*)
It is important to remember that, in either case, HoldForm modifies how the answer is displayed, and not the underlying answer itself.