If so, does fuel consumption only affect speed changes in the case of automobiles in a situation where there is no energy loss due to air resistance or frictional force?
Exactly the same problem can be observed in case of automobile moving on the surface of the Earth. Suppose, a car of mass $m$ is moving at speed $v$. Then it burns some fuel and increases its speed to $2v$. Then the change of kinetic energy is
$$
\frac{m(2v)^2}2 - \frac{mv^2}2 = \frac32mv^2
$$
However, if you consider this situation from a point of view of another car, moving alongside the first one with the speed $v$, then the initial speed of the car is zero, and the final speed is just $v$, so the change of the kinetic energy is
$$
\frac{mv^2}2 - 0 = \frac12mv^2
$$
Thus, from this point of view the burned fuel produces 3 times less energy increase. What is going on?
You have forgotten the kinetic energy of the Earth. The burned fuel gives its energy to the whole system, which is not an isolated car, but a system of the car and the Earth. If we treat this system as a closed one, then its momentum should be conserved. When the car accelerates from speed $v$ to speed $2v$ (or, in the second case, from speed 0 to speed $v$), its momentum increases by $mv$. This change of the car's momentum is compensated by the change of the momentum of the Earth. To compensate the forward momentum of the car $mv$ the Earth gets an additional backward speed $u$:
$$
Mu = mv,\qquad u=\frac mMv,
$$
where $M$ is the mass of the Earth.
So, in the first case the initial speed of the car was $v$, the initial speed of the Earth was 0. The final speed of the car is $2v$, the final speed of the Earth is $-u$. The change of the kinetic energy is
$$
\frac{m(2v)^2}2 + \frac{Mu^2}2 - \left(\frac{mv^2}2 + 0\right) =
\frac{3mv^2}2 + \frac{M\left(\frac{mM}v\right)^2}2=\frac{3mv^2}2+\frac{m^2v^2}{2M}
$$
Since the mass of the Earth is much larger than the mass of the car, $M\gg m$, the second term is almost zero and we get our old answer, $\displaystyle\frac{3mv^2}2$.
However, in the second case the situation is quite different. The initial speed of the car is zero, but the initial speed of the Earth is $-v$. The final speed of the car is $v$, the final speed of the Earth is $-(v+u)$. Thus, the change of the kinetic energy is
$$
\frac{mv^2}2 + \frac{M(v+u)^2}2 - \left(0 + \frac{Mv^2}2\right) =
\frac{mv^2}2 + \frac{M(v^2+2vu+u^2)}2-\frac{Mv^2}2=
\frac{mv^2}2 + \frac{M(2vu+u^2)}2
$$
Now we substitute $\displaystyle u=\frac mMv$ in the second term:
$$
\frac{mv^2}2 + \frac{M(2v\frac mM v+\left(\frac mMv\right)^2)}2 =
\frac{mv^2}2 + \frac{2mv^2}2+ \frac{m^2v^2}{2M}
$$
This is exactly the same answer which we got in the first case. The last term is again vanishing in limit $M\gg m$, so the simple answer is again $\displaystyle\frac{3mv^2}2$.
Surprisingly, in the second case a substantial part of the energy of the burned fuel is used to increase the kinetic energy of the Earth, not the car. We consume two times more energy to accelerate the Earth than the car itself!
The same reasoning is valid for your original question. You have forgotten about the kinetic energy of the jet. In order to accelerate the rocket you burn some fuel, its energy is used to accelerate both the rocket and the jet. If you carefully calculate the change of the kinetic energy of the rocket and the jet in both reference frames, you'll find no discrepancies.