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I was pouring water into a cup.

As the cup filled up, the height between the water in the cup and the spout decreased to about 3cm.

I was able to pour slowly such that the diameter of the falling water column was smaller than the diameter of a drop of water. Furthermore, when the water column contacted the cup's water, there was no splashing.

There were distinct bands that appeared in the water column, like the water column was varying in size.

How would you explain this phenomenon? Is it due to the slow pouring, so that the surface tension just manages to hold neighboring water droplets together?

Or is it that upon contact of the falling water with the water in the mug, waves are produced, which travel back up the water column, and upon equilibrium, appear as standing waves?

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If it's not the case that there are minute differences in flow rate, and your hand is completely steady as you pour, I'd venture that it could be an interplay between gravity and surface tension. A smaller stream has a greater surface-to-volume ratio, flows slower, and has considerably less mass than even a slightly larger stream. All of these factors seem like they would allow a small stream to be more affected by surface tension. Perhaps it's the case that the liquid is on the verge of becoming a series of drops?