When I compile a document with PdfLaTeX + View PDF quick build command option selected, Texmaker outputs these files in the same directory with the .tex file:
MyDoc.aux
MyDoc.log
MyDoc.pdf
MyDoc.synctex.gz
Among these files I only need the PDF file. The other compiler output files my be important for debugging or for some other purposes, but as a standard user I find them as nothing but garbage. How do I disable generation of these other three files?
Options -> Configure TeXmaker -> Commands. There you have a checkbox labeled:'Use a "build" subdirectory for output files'. This will mean that the output PDF file will also go there. I don't know of any finer grained control as to where the different files should go. – Count Zero Apr 12 '13 at 11:28