I am rebuilding one of my Docker images and a collection seems to have vanished. Although I name it in my profile, collection-science isn't being installed.
Can anyone tell me why?
The profile:
selected_scheme scheme-basic
TEXDIR /usr/local/texlive/2016
TEXMFCONFIG ~/.texlive2016/texmf-config
TEXMFHOME ~/texmf
TEXMFLOCAL /usr/local/texlive/texmf-local
TEXMFSYSCONFIG /usr/local/texlive/2016/texmf-config
TEXMFSYSVAR /usr/local/texlive/2016/texmf-var
TEXMFVAR ~/.texlive2016/texmf-var
option_doc 0
option_src 0
collection-fontsrecommended 1
collection-pictures 1
collection-science 1
collection-genericrecommended 1
collection-genericextra 1
collection-latex 1
collection-latexrecommended 1
collection-latexextra 1
The command and output:
./install-tl --profile=/staging/install-tl.profile
Automated TeX Live installation using profile: /staging/install-tl.profile
Loading http://mirror.ox.ac.uk/sites/ctan.org/systems/texlive/tlnet/tlpkg/texlive.tlpdb
Installing TeX Live 2016 from: http://mirror.ox.ac.uk/sites/ctan.org/systems/texlive/tlnet (verified)
Platform: i386-linux => 'GNU/Linux on Intel x86'
Distribution: net (downloading)
Using URL: http://mirror.ox.ac.uk/sites/ctan.org/systems/texlive/tlnet
Directory for temporary files: /tmp/gUkPYfsHfx
Installing to: /usr/local/texlive/2016
Installing [0001/1524, time/total: ??:??/??:??]: 2up [5k]
Installing [0002/1524, time/total: 00:00/00:00]: ESIEEcv [2k]
Installing [0003/1524, time/total: 00:00/00:00]: GS1 [4k]
Installing [0004/1524, time/total: 00:00/00:00]: HA-prosper [28k]
[..]
Installing [0205/1524, time/total: 00:32/01:01]: cntformats [3k]
Installing [0206/1524, time/total: 00:33/01:03]: cntperchap [4k]
Installing [0207/1524, time/total: 00:33/01:03]: codedoc [10k]
Installing [0208/1524, time/total: 00:33/01:03]: codepage [11k]
Installing [0209/1524, time/total: 00:33/01:03]: codesection [3k]
Installing [0210/1524, time/total: 00:33/01:03]: collcell [3k]
Installing [0211/1524, time/total: 00:33/01:03]: collectbox [3k]
Installing [0212/1524, time/total: 00:33/01:03]: collection-basic [1k]
Installing [0213/1524, time/total: 00:33/01:03]: collection-fontsrecommended [1k]
Installing [0214/1524, time/total: 00:33/01:03]: collection-genericextra [1k]
Installing [0215/1524, time/total: 00:33/01:03]: collection-genericrecommended [1k]
Installing [0216/1524, time/total: 00:33/01:03]: collection-latex [1k]
Installing [0217/1524, time/total: 00:33/01:03]: collection-latexextra [6k]
Installing [0218/1524, time/total: 00:34/01:05]: collection-latexrecommended [1k]
Installing [0219/1524, time/total: 00:34/01:05]: collection-pictures [2k]
Installing [0220/1524, time/total: 00:34/01:05]: colordoc [3k]
Installing [0221/1524, time/total: 00:34/01:05]: colorinfo [2k]
Installing [0222/1524, time/total: 00:34/01:05]: coloring [2k]
Installing [0223/1524, time/total: 00:34/01:05]: colorsep [2k]
[..]
Installing [1517/1524, time/total: 05:19/05:19]: yplan [7k]
Installing [1518/1524, time/total: 05:19/05:19]: yplan.i386-linux [1k]
Installing [1519/1524, time/total: 05:19/05:19]: zapfchan [79k]
Installing [1520/1524, time/total: 05:20/05:20]: zapfding [46k]
Installing [1521/1524, time/total: 05:20/05:20]: zed-csp [8k]
Installing [1522/1524, time/total: 05:21/05:21]: ziffer [2k]
Installing [1523/1524, time/total: 05:21/05:21]: zwgetfdate [2k]
Installing [1524/1524, time/total: 05:21/05:21]: zwpagelayout [9k]
Time used for installing the packages: 05:22
running mktexlsr /usr/local/texlive/2016/texmf-dist ...
writing fmtutil.cnf to /usr/local/texlive/2016/texmf-dist/web2c/fmtutil.cnf
writing updmap.cfg to /usr/local/texlive/2016/texmf-dist/web2c/updmap.cfg
writing language.dat to /usr/local/texlive/2016/texmf-var/tex/generic/config/language.dat
writing language.def to /usr/local/texlive/2016/texmf-var/tex/generic/config/language.def
writing language.dat.lua to /usr/local/texlive/2016/texmf-var/tex/generic/config/language.dat.lua
running mktexlsr /usr/local/texlive/2016/texmf-var /usr/local/texlive/2016/texmf-config /usr/local/texlive/2016/texmf-dist ...
running updmap-sys --nohash ...done
re-running mktexlsr /usr/local/texlive/2016/texmf-var /usr/local/texlive/2016/texmf-config ...
pre-generating all format files, be patient...
running fmtutil-sys --no-error-if-no-engine=luajittex,mfluajit --no-strict --all ...done
running package-specific postactions
finished with package-specific postactions
See
/usr/local/texlive/2016/index.html
for links to documentation. The TeX Live web site
contains updates and corrections: http://tug.org/texlive.
TeX Live is a joint project of the TeX user groups around the world;
please consider supporting it by joining the group best for you. The
list of user groups is on the web at http://tug.org/usergroups.html.
Add /usr/local/texlive/2016/texmf-dist/doc/info to INFOPATH.
Add /usr/local/texlive/2016/texmf-dist/doc/man to MANPATH
(if not dynamically found).
Most importantly, add /usr/local/texlive/2016/bin/i386-linux
to your PATH for current and future sessions.
Welcome to TeX Live!
Logfile: /usr/local/texlive/2016/install-tl.log
I only spotted this because I'm still patching bytefield.sty (though not for long, as I've just discovered that the patch is no longer necessary), but its files are no longer present post-install so the sed command errors out.
auto-remove': I'm not sure it's deliberate but suggest raising on the TeX Live mailing list to get confirmation. (I have all of TL installed so removing the collection doesn't affect my installed packages.) – Joseph Wright Nov 04 '16 at 16:38