Today I encountered an issue with biblatex and it seemed I had to update the biblatex package to the newest version to fix this.
So I went for a complete update of my MikTeX installation (installed all possible package updates... maybe that was a mistake, dunno). I knew I needed the newest biber (1.7) then, so I downloaded that. Log says biblatex is v2.7a. On the way I also updated to the newest apa6.cls and to TeXnicCenter 2.02 stable (32-bit on Win 7, used a beta before).
Before doing all this stuff, everything compiled properly... but now I get these Warnings like citation undefined... empty bibliography, undefined references etc. Any help would be highly appreciated!
Here is my TeXnicCenter config of biber:

Here is the working example, notice that I got backend=biber:
\documentclass[man,12pt,a4paper,noextraspace,donotrepeattitle,longtable]{apa6} % 12 pt., doppelter Zeilenabstand usw.
\usepackage[latin1]{inputenc} % für ä,ö,ü,Ä,Ö,Ü,ß usw.
\usepackage[english,ngerman]{babel}
\usepackage[T1]{fontenc} % für exakte Darstellung von Umlauten wie Ä
\usepackage{lipsum} % Dummy-Text
\setlipsumdefault{8} % Standard-Einstellung: Verwendung nur eines Lipsum-Paragraphs (in diesem Fall des achten)
\setlength{\LTleft}{0pt} % linksbündige Tabellen (longtable)
\usepackage{environ}
\usepackage{threeparttablex}
\usepackage{textgreek} % griechische Buchstaben im Text-Modus
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ von apa6.cls automatisch geladene Packages
% booktabs, etoolbox, lmodern, threeparttable
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Scriptsize (ca. 8pt) Für Anmerkungen in Tabellen
\makeatletter
\g@addto@macro\TPT@defaults{\scriptsize}
\makeatother
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++ Bibliographie/Biblatex/Literatur
\usepackage{csquotes}
\usepackage[style=apa,sortcites=true,sorting=nyt,backend=biber]{biblatex}
\DeclareLanguageMapping{ngerman}{ngerman-apa}
\DefineBibliographyStrings{ngerman}{ % ändert den Titel des LV von Literatur in Literaturverzeichnis
references = {Literaturverzeichnis}
}
\DefineBibliographyStrings{ngerman}{% % ändert "u. a." in "et al."
andothers ={et\addabbrvspace al\adddot},
andmore ={et\addabbrvspace al\adddot},
}
\addbibresource{Literatur.bib} % lädt LV-Datei
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
% Hier werden die (Unter-)Überschriften neu definiert (d. h. nicht fett usw.)
\makeatletter
\renewcommand{\section}{\@startsection {section}{1}
{\z@}
{\b@level@one@skip}
{\e@level@one@skip}
{\centering\normalfont\normalsize}}
\renewcommand{\subsection}{\@startsection{subsection}{2}
{\z@}
{\b@level@two@skip}
{\e@level@two@skip}
{\centering\normalfont\normalsize\itshape}}
\renewcommand{\subsubsection}{\@startsection{subsubsection}{3}
{\z@}
{\b@level@two@skip}
{\e@level@two@skip}
{\normalfont\normalsize\itshape}}
\renewcommand{\paragraph}{\@startsection{paragraph}{4}{\parindent}%
{0\baselineskip \@plus 0.2ex \@minus 0.2ex}%
{-1em}%
{\normalfont\normalsize\itshape\addperi}}
\makeatother
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++ TITELBLATT
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
\title{title}
\shorttitle{shorttitle}
\renewcommand{\rheadname}{Kolumnentitel} % Running head übersetzt
\author{\null C A}
\affiliation{
\null
Universität
Fachbereich
Institut
Fachgebiet
}
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++ ZUSAMMENFASSUNG / ABSTRACT
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
\abstract{\noindent
\textit{Theoretischer Hintergrund:}
\textit{Fragestellung:}
\textit{Methode:}
\textit{Ergebnisse:}
\textit{Schlussfolgerungen:}
\begin{otherlanguage}{english}
\clearpage
\section{\normalfont\normalsize\abstractname}
\textit{Background:}
\textit{Objective:}
\textit{Methods:}
\textit{Results:}
\textit{Conclusions:}
\par
\end{otherlanguage}
}
\patchcmd{\maketitle}{\abstractname}{Zusammenfassung}{}{} % Umbenennen des ersten Abstracts in "Zusammenfassung" mit Paket etoolbox
\begin{document}
\thispagestyle{empty}
\vspace*{.1\textheight} % Vertikaler Abstand zum oberen Seitenrand
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++ Deckblatt
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
\begin{center}
Title
\null
Wissenschaftliche Arbeit
\null
Universität
Fachbereich
Fachgebiet
\null
vorgelegt von
\null
C A
\null
\selectlanguage{ngerman}Bla, den \today
\end{center}
\pagestyle{otherpage}
\clearpage\setcounter{page}{1}
\thispagestyle{titlepage}\maketitle % Einfügen der Titelseite
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++ EINLEITUNG
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
\section{Einleitung}
\lipsum
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++ METHODE
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
\newpage{\section{Methode}}
\subsection{Überblick}
\lipsum
\subsection{Stichprobe}
\subsection{Material}
\subsubsection{Stimulusmaterial}
\paragraph{Wortpaare}
\lipsum
\subsubsection{Geräte/Apparaturen}
\subsubsection{Aufgabe}
\lipsum
\subsubsection{Fragebögen}
\paragraph{Index}
\lipsum
\paragraph{Screening}
\lipsum
\paragraph{Inventory}
\lipsum
\cite{MacLeodetal2002}
\subsubsection{Übungen}
\lipsum
\subsection{Versuchsablauf}
\lipsum
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++ ERGEBNISSE
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
\newpage{\section{Ergebnisse}}
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++ DISKUSSION
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
\newpage{\section{Diskussion}}
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
%+++ Literatur
%+++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
\printbibliography
\end{document}
Edit: The .bib content I am citing in this example:
@article{MacLeodetal2002,
author={Colin MacLeod and Elizabeth Rutherford and Lyn Campbell and Greg Ebsworthy and Lin Holker},
year={2002},
title={Selective attention and emotional vulnerability: Assessing the causal basis of their association through the experimental manipulation of attentional bias},
journal={Journal of Abnormal Psychology},
volume={111},
number={1},
pages={107-123},
}
Edit2: I don't know if this is helping... the biber log:

.blgfile the run of Biber produces? – egreg Oct 08 '13 at 21:59